AmiGO is a public web interface for the Gene Ontology, providing access to gene and gene product annotations across species. It's designed for researchers and bioinformaticians working with functional genomics data, allowing them to explore biological processes, molecular functions, and cellular components. The project includes installation instructions, testing procedures, and deployment workflows for both traditional and Docker-based setups.
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Support the dependencies of kltm/amigo
Web component to visualize GO-CAM
BBOP JS namespace bundle.
A set of useful and common JavaScript functions to supplement other more basic utility libraries.
General purpose (mathematical) graph library in JavaScript.
A subclass of bbop-graph that layers on a complete annotation and graph editing model for the Noctua set of tools.
Manager for handling communication and callbacks with a Minerva instances (mediated by Barista).
Response type and API for handling the returns from a GOlr instance in a standard way.
The is the 'new' version of the manager event model for BBOP systems.
Generic handler for dealing with the gross parsing and handling of responses from a REST service.
The most popular front-end framework for developing responsive, mobile first projects on the web.
A handling library for OWL-style class expressions in JavaScript.
Graph theory (a.k.a. network) library for analysis and visualisation
The Dagre layout for DAGs and trees for Cytoscape.js
Graph layout for JavaScript
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GOlr configuration file handling and API.
JavaScript library for DOM operations
A complete, bidirectional, JXON library
A sensible Markdown parser for javascript
A markdown parser built for speed
JavaScript library for generating request information for interactions with a Minerva server.
parse argument options
Logic-less {{mustache}} templates with JavaScript
The open source javascript graphing library that powers plotly
A kickass library to manage your poppers
File caching and template rendering femto-framework using mustache and some assumptions.
Simplified HTTP request client.
A Solr client library for indexing, adding, deleting, committing, optimizing and searching documents within an Apache Solr installation (version>=3.2)
"time.h" bindings for Node.js
JavaScript's functional programming helper library.
String manipulation extensions for Underscore.js javascript library.
Standalone JavaScript YAML 1.2 Parser & Encoder. Works under node.js and all major browsers. Also brings command line YAML/JSON conversion tools.
Babel compiler core.
A Babel preset for each environment.
Babel browserify transform
browser-side require() the node way
A Browserify transform for bundling, rebasing, inlining, and minifying CSS files
Makes CommonJS-incompatible modules browserifyable.
BDD/TDD assertion library for node.js and the browser. Test framework agnostic.
Bump npm versions with Gulp (gulpjs.com)
run node.js server and automatically restart for your development.
Fast (and loose) selective `process.env` replacer using js-tokens instead of an AST
simple, flexible, fun test framework
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