intermine/imjs

ECMAScript parser

A pure JavaScript W3C standard-based (XML DOM Level 2 Core) DOMParser and XMLSerializer module.

rawStream.pipe(JSONStream.parse()).pipe(streamOfObjects)

A lightweight library that provides tools for organizing asynchronous code

A library for promises (CommonJS/Promises/A,B,D)

construct pipes of streams of events

JavaScript's functional programming helper library.

A CoffeeScript documentation generator.

Unfancy JavaScript

Selectively replace Node-style environment variables with plain strings.

ECMAScript parsing infrastructure for multipurpose analysis

The JavaScript Task Runner

Bump package version

Specify an ENV configuration for future tasks in the chain

A grunt task for running server side mocha tests

simple, flexible, fun test framework

HTTP server mocking and expectations library for Node.js

test framework agnostic BDD-style assertions

Standalone version of Backbone.Events

http module compatability for browserify

Array.prototype.find ES6 polyfill.

Browser port of the Node.js 'request' package

Reduce stream data to a single value

remove requires

Grunt task for node-browserify

Lint your Coffee

Create symbolic links.

Grunt task for jscoverage; which will parse your source code and generate an instrumented version allowing testing tools to generate code coverage reports

insert implicit module globals into a module-deps stream

Oboe.js reads json, giving you the objects as they are found without waiting for the stream to finish

Visualize gene expression by tissue using ArrayExpress data. Easily see which expressions are up- or down-regulated.

Visualize protein expression in organ tissue with a heatmap showing overall and cell specific antibody staining values.

Visualize gene expression by disease using ArrayExpress data. Easily see which expressions are up- or down-regulated.

Visualize expression data using a combination of box and swarm plots. Both disease and organism expressions are shown side by side along with a five pointer summary of the dataset. Hover over the plot for more information.

Visualize gene ontology terms by their amount of matches for items in a list. Allows you to filter and adjust the enrichment results.

Visualize protein structures using different types of 3D models. You can select from multiple [RCSB](https://www.rcsb.org/) PDB ID.

Visualize relation and linkages between the proteins associated with a particular gene.

Visualize gene expression by tissue and stage with help of expression charts. Easily see which expressions are up- or down-regulated.

BlueGenes wrapper for protvista protein feature viewer

Visualize gene and protein interaction networks using [cytoscape.js](http://js.cytoscape.org/).

view intermine gene network interaction using cytoscape.js

UI widgets for displaying query results in interactive tables

UI widgets for displaying query results in interactive tables